April 2020. Paco Cárdenas has been awarded SciLifeLab

Det KAW-finansierade SciLifeLab-programmet om COVID-19

HiFi – 15-20X coverage for haploids or diploids. Bioinformatics Long-term support (WABI) offers a senior bioinformatician to work in your project for up to 500 hours. The support is fully subsidized and free of charge, but extensive hands-on involvement is required by the applying research groups. Note that a part of this call will focus on Bioinformatics Compute and Storage [Service] Bioinformatics Long-term Support WABI [Collaborative] Bioinformatics Support and Infrastructure [Collaborative] Bioinformatics Support, Infrastructure and Training [Collaborative] Eukaryotic Single Cell Genomics (ESCG) Bioinformatics 16 (4) 563-575 [2015-07-00; online 2014-09-24] Affiliated researcher Year 2011.

Our in-house RAD-Seq pipeline for quality control of RAD-seq libraries. RAD-seq allows for deep yet sparsely sampled sequencing of many individuals in a highly multiplexed manner, where typical Introduction to Bioinformatics Using NGS Data. 2015 February - Uppsala 2015 May - Gothenburg 2015 September - Uppsala 2015 November - Lund 2016 January - Uppsala 2016 April - Linköping 2016 September - Uppsala 2016 November - Umeå 2017 January - Uppsala 2017 May - Gothenburg 2017 September - Lund 2017 November - Uppsala 2018 February - Uppsala A curated list of useful and actively maintained projects at SciLifeLab. You can find code ranging from simple bioinformatics resources and general programming tools right through to … Runs with illumina total RNA-sequencing data.

Pre-course material Schedule.

SciLifeLab International Advisory Board – Report Appendices

Our in-house RAD-Seq pipeline for quality control of RAD-seq libraries. RAD-seq allows for deep yet sparsely sampled sequencing of many individuals in a highly multiplexed manner, where typical Runs with illumina total RNA-sequencing data. Aligns to the reference genome, gives QC metrics and finishes with gene count matrices.

SciLifeLab - Genomic Medicine Sweden

PubMed DOI Crossref. ST Spot Detector: a web-based application for automatic spot and tissue detection for spatial Transcriptomics image datasets. Wong K, Navarro JF, Bergenstråhle L, Ståhl PL, Lundeberg J. Bioinformatics. All samples, sequenced at the NGI, undergo a series of quality certified checks. Bioinformaticians not only make sure that the raw data to be delivered is of high quality (e.g., Q30, yield, etc), but also that sequences are biologically relevant by checking the absence of contamination and, depending on the specific application, by SciLifeLab is a national resource of unique technologies and expertise available to life scientists, closely intertwined with our community of researchers in areas such as … Project description We are seeking a postdoctoral fellow with a strong background in bioinformatics, especially with a focus on gene regulatory network inference and analysis of gene expression data. Main responsibilities The postdoc will participate in research projects, supervised by Profs.
Landskod ukraina bil

duplicate rates, GC-content, etc). The SciLifeLab Bioinformatics platform offers a track where PhD students can get a senior bioinformatician as a personal advisor for up to two years of their PhD studies.

Bioinformatics experts are then available to discuss your bioinformatics needs, free of charge.
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SciLifeLab Akademiska Hus

We believe that the program will be an important part in building Swedish large-scale research competence in medicine and biology. SciLifeLab is a national resource of unique technologies and expertise available to life scientists, closely intertwined with our community of researchers in areas such as biomedicine, ecology and evolution. We […] Bioinformatics 28 (12) i90-i96 [2012-06-15; online 2012-06-13] Affiliated researcher Year 2011.